DICOM PS3.16 2016c - Content Mapping Resource

L Correspondence of Anatomic Region Codes and Body Part Examined Defined Terms

This Annex defines a correspondence between the codes used in context groups for Anatomic Region Sequence (0008,2218) and Body Part Examined (0018,0015), as well as providing a list of the Defined Terms for Body Part Examined (0018,0015), for human use in Table L-1 and for large animal use in Table L-2 and for small animal use in Table L-3.

Table L-1. Corresponding SNOMED Terms for Human Use

SNOMED Code Value

Code Meaning

Body Part Examined

T-D4000

Abdomen

ABDOMEN

R-FAB57

Abdomen and Pelvis

ABDOMENPELVIS

T-42500

Abdominal aorta

T-15420

Acromioclavicular joint

T-B3000

Adrenal gland

ADRENAL

T-15750

Ankle joint

ANKLE

T-48503

Anomalous pulmonary vein

T-49215

Antecubital vein

T-48440

Anterior cardiac vein

T-45530

Anterior communicating artery

T-45730

Anterior spinal artery

T-47700

Anterior tibial artery

T-59490

Anus, rectum and sigmoid colon

T-42000

Aorta

AORTA

T-42300

Aortic arch

D3-81922

Aortic fistula

T-32602

Apex of left ventricle

T-280A0

Apex of Lung

T-32502

Apex of right ventricle

T-41000

Artery

T-42100

Ascending aorta

T-32100

Atrium

T-D8104

Axilla

AXILLA

T-47100

Axillary Artery

T-49110

Axillary vein

T-48340

Azygos vein

T-D2100

Back

BACK

A-00203

Baffle

T-45800

Basilar artery

T-60610

Bile duct

T-74000

Bladder

BLADDER

T-DD123

Bladder and urethra

T-D00AB

Body conduit

T-49424

Boyd's perforating vein

T-47160

Brachial artery

T-49350

Brachial vein

T-A0100

Brain

BRAIN

T-04000

Breast

BREAST

T-D6500

Broad ligament

T-26000

Bronchus

BRONCHUS

T-D1206

Buccal region of face

T-D2600

Buttock

BUTTOCK

T-12770

Calcaneus

CALCANEUS

T-D9440

Calf of leg

CALF

T-72100

Calyx

T-45010

Carotid Artery

CAROTID

T-49240

Cephalic vein

T-A6000

Cerebellum

CEREBELLUM

T-45510

Cerebral artery

T-11501

Cervical spine

CSPINE

T-D00F7

Cervico-thoracic spine

CTSPINE

T-83200

Cervix

CERVIX

T-D1206

Cheek

CHEEK

T-D3000

Chest

CHEST

R-FAB55

Chest and Abdomen

CHESTABDOMEN

R-FAB56

Chest, Abdomen and Pelvis

CHESTABDPELVIS

T-45526

Circle of Willis

CIRCLEOFWILLIS

T-12310

Clavicle

CLAVICLE

T-11BF0

Coccyx

COCCYX

T-59300

Colon

COLON

D4-31005

Common atrium

T-45100

Common carotid artery

T-46710

Common iliac artery

T-48920

Common iliac vein

D4-31120

Common ventricle

D4-32504

Congenital coronary artery fistula to left atrium

D4-32506

Congenital coronary artery fistula to left ventricle

D4-32509

Congenital coronary artery fistula to right atrium

D4-32510

Congenital coronary artery fistula to right ventricle

D3-40208

Congenital pulmonary arteriovenous fistula

T-AA200

Cornea

CORNEA

T-43000

Coronary artery

CORONARYARTERY

T-48410

Coronary sinus

T-A0193

Cranial venous system

T-42400

Descending aorta

T-49429

Dodd's perforating vein

T-58200

Duodenum

DUODENUM

T-AB000

Ear

EAR

T-15430

Elbow joint

ELBOW

T-41000

Endo-arterial

T-32000

Endo-cardiac

T-56000

Endo-esophageal

T-21300

Endo-nasal

T-23050

Endo-nasopharyngeal

T-59600

Endo-rectal

T-71000

Endo-renal

T-73000

Endo-ureteric

T-75000

Endo-urethral

T-82000

Endo-vaginal

T-40000

Endo-vascular

T-48000

Endo-venous

T-74250

Endo-vesical

T-D0010

Entire body

WHOLEBODY

T-D4200

Epigastric region

T-56000

Esophagus

ESOPHAGUS

T-DD163

Esophagus, stomach and duodenum

T-AB200

External auditory canal

T-45200

External carotid artery

T-46910

External iliac artery

T-48930

External iliac vein

T-D0300

Extremity

EXTREMITY

T-AA000

Eye

EYE

T-AA810

Eyelid

EYELID

T-D1200

Face

FACE

T-45240

Facial artery

T-11196

Facial bones

T-47400

Femoral artery

T-49410

Femoral vein

T-12710

Femur

FEMUR

T-D8800

Finger

FINGER

T-D2310

Flank

T-15200

Fontanel of skull

T-D9700

Foot

FOOT

T-D8500

Forearm

T-63000

Gallbladder

GALLBLADDER

T-48820

Gastric vein

T-47490

Genicular artery

T-D2600

Gluteal region

T-48420

Great cardiac vein

T-D8700

Hand

HAND

T-D1100

Head

HEAD

T-D1000

Head and Neck

HEADNECK

T-32000

Heart

HEART

T-46420

Hepatic artery

T-48720

Hepatic vein

T-15710

Hip joint

HIP

T-12410

Humerus

HUMERUS

T-4942A

Hunterian perforating vein

T-D4240

Hypogastric region

T-D161E

Submental

T-55300

Hypopharynx

T-58600

Ileum

ILEUM

T-41068

Iliac and/or femoral artery

T-46700

Iliac artery

T-12340

Ilium

ILIUM

T-48470

Inferior cardiac vein

T-48540

Inferior left pulmonary vein

T-46520

Inferior mesenteric artery

T-48520

Inferior right pulmonary vein

T-48710

Inferior vena cava

T-D7000

Inguinal region

T-46010

Innominate artery

T-48620

Innominate vein

T-AB959

Internal Auditory Canal

IAC

T-45300

Internal carotid artery

T-46740

Internal iliac artery

T-48170

Internal jugular vein

T-46200

Internal mammary artery

T-D4010

Intra-abdominal

G-A15A

Intra-articular

T-56000

Intra-esophageal

T-D6221

Intra-pelvic

T-D3000

Intra-thoracic

T-D1400

Intracranial

T-D1213

Jaw region

JAW

T-58400

Jejunum

JEJUNUM

T-15001

Joint

D4-31052

Juxtaposed atrial appendage

T-71000

Kidney

KIDNEY

T-D9200

Knee

KNEE

T-45410

Lacrimal artery

T-45416

Lacrimal artery of right eye

T-59000

Large intestine

T-24100

Larynx

LARYNX

T-32300

Left atrium

T-32310

Left auricular appendage

T-47420

Left femoral artery

T-D4211

Left hypochondriac region

T-D7020

Left inguinal region

T-D4140

Left lower quadrant of abdomen

T-D2340

Left lumbar region

T-44400

Left pulmonary artery

T-D4130

Left upper quadrant of abdomen

T-32600

Left ventricle

T-32640

Left ventricle inflow

D4-31022

Left ventricle outflow chamber

T-32650

Left ventricle outflow tract

T-45230

Lingual artery

T-62000

Liver

LIVER

T-04003

Lower inner quadrant of breast

T-D9400

Lower leg

LEG

T-04005

Lower outer quadrant of breast

T-46960

Lumbar artery

T-D2300

Lumbar region

T-11503

Lumbar spine

LSPINE

T-D00F9

Lumbo-sacral spine

LSSPINE

T-40230

Lumen of blood vessel

T-28000

Lung

LUNG

T-11180

Mandible

JAW

T-11133

Mastoid bone

T-11170

Maxilla

MAXILLA

T-D3300

Mediastinum

MEDIASTINUM

T-46500

Mesenteric artery

T-4884A

Mesenteric vein

T-51000

Mouth

MOUTH

T-11149

Nasal bone

T-2300C

Nasopharynx

T-D1600

Neck

NECK

R-FAB52

Neck and Chest

NECKCHEST

R-FAB53

Neck, Chest and Abdomen

NECKCHESTABDOMEN

R-FAB54

Neck, Chest, Abdomen and Pelvis

NECKCHESTABDPELV

T-21000

Nose

NOSE

T-45250

Occipital artery

T-48214

Occipital vein

T-D4450

Omental bursa

T-D4600

Omentum

T-45400

Ophthalmic artery

T-11102

Optic canal

T-D14AE

Orbital structure

ORBIT

T-87000

Ovary

OVARY

T-65000

Pancreas

PANCREAS

T-65010

Pancreatic duct

T-65600

Pancreatic duct and bile duct systems

T-22000

Paranasal sinus

T-D3136

Parasternal

T-B7000

Parathyroid

T-61100

Parotid gland

PAROTID

T-12730

Patella

PATELLA

D4-32012

Patent ductus arteriosus

T-D6000

Pelvis

PELVIS

R-FAB58

Pelvis and lower extremities

T-91000

Penis

PENIS

T-D2700

Perineum

T-47630

Peroneal artery

T-55000

Pharynx

PHARYNX

T-20101

Pharynx and larynx

T-47500

Popliteal artery

T-D9310

Popliteal fossa

T-48810

Portal vein

T-45320

Posterior communicating artery

T-49535

Posterior medial tributary

T-47600

Posterior tibial artery

T-F7001

Primitive aorta

T-F7040

Primitive pulmonary artery

T-9200B

Prostate

PROSTATE

T-44000

Pulmonary artery

D4-33142

Pulmonary artery conduit

T-32190

Pulmonary chamber of cor triatriatum

T-48581

Pulmonary vein

D4-33512

Pulmonary vein confluence

D4-33514

Pulmonary venous atrium

T-47300

Radial artery

T-12420

Radius

RADIUS

T-12403

Radius and ulna

RADIUSULNA

T-59600

Rectum

RECTUM

T-46600

Renal artery

T-72000

Renal pelvis

T-48740

Renal vein

T-D4900

Retroperitoneum

T-11300

Rib

RIB

T-32200

Right atrium

T-32210

Right auricular appendage

T-47410

Right femoral artery

T-D4212

Right hypochondriac region

T-D7010

Right inguinal region

T-D4120

Right lower quadrant of abdomen

T-D2342

Right lumbar region

T-44200

Right pulmonary artery

T-D4110

Right upper quadrant of abdomen

T-32500

Right ventricle

T-32540

Right ventricle inflow

D4-31032

Right ventricle outflow chamber

T-32550

Right ventricle outflow tract

T-15680

Sacroiliac joint

T-11AD0

Sacrum

SSPINE

T-D930A

Saphenofemoral junction

T-49530

Saphenous vein

T-D1160

Scalp

SCALP

T-12280

Scapula

SCAPULA

T-AA110

Sclera

SCLERA

T-98000

Scrotum

SCROTUM

T-D1460

Sella turcica

T-12980

Sesamoid bones of foot

T-D2220

Shoulder

SHOULDER

T-59470

Sigmoid colon

T-11100

Skull

SKULL

T-58000

Small intestine

T-A7010

Spinal cord

T-D04FF

Spine

SPINE

T-C3000

Spleen

SPLEEN

T-46460

Splenic artery

T-48890

Splenic vein

T-15610

Sternoclavicular joint

T-11210

Sternum

STERNUM

T-57000

Stomach

STOMACH

T-46100

Subclavian artery

T-48330

Subclavian vein

T-D4210

Subcostal

T-D1603

Submandibular area

T-61300

Submandibular gland

SUBMANDIBULAR

T-D3213

Subxiphoid

T-45270

Superficial temporal artery

T-48530

Superior left pulmonary vein

T-46510

Superior mesenteric artery

T-48510

Superior right pulmonary vein

T-45210

Superior thyroid artery

T-48610

Superior vena cava

T-D1620

Supraclavicular region of neck

T-D4240

Suprapubic region

T-11218

Suprasternal notch

T-44007

Systemic collateral artery to lung

D4-33516

Systemic venous atrium

T-15770

Tarsal joint

T-15290

Temporomandibular joint

TMJ

T-94000

Testis

TESTIS

T-D9100

Thigh

THIGH

T-42070

Thoracic aorta

T-11502

Thoracic spine

TSPINE

T-D00F8

Thoraco-lumbar spine

TLSPINE

T-D3000

Thorax

T-D8810

Thumb

THUMB

T-C8000

Thymus

THYMUS

T-B6000

Thyroid

THYROID

T-12740

Tibia

TIBIA

T-12701

Tibia and fibula

TIBIAFIBULA

T-D9800

Toe

TOE

T-53000

Tongue

TONGUE

T-25000

Trachea

TRACHEA

T-DD006

Trachea and bronchus

D4-31400

Truncus arteriosus communis

T-46400

Truncus coeliacus

T-12430

Ulna

ULNA

T-47200

Ulnar artery

T-F1810

Umbilical artery

T-D4230

Umbilical region

T-48817

Umbilical vein

T-D8200

Upper arm

ARM

T-04002

Upper inner quadrant of breast

T-04004

Upper outer quadrant of breast

T-7000B

Upper urinary tract

T-73000

Ureter

URETER

T-75000

Urethra

URETHRA

T-83000

Uterus

UTERUS

T-88920

Uterus and fallopian tubes

T-82000

Vagina

VAGINA

A-04140

Vascular graft

T-48000

Vein

T-48003

Venous network

T-32400

Ventricle

T-45700

Vertebral artery

T-11011

Vertebral column and cranium

T-81000

Vulva

VULVA

T-15460

Wrist joint

WRIST

T-11166

Zygoma

ZYGOMA


Note

In prior versions of this table, different codes were used for some concepts; see PS3.16-2011.

Table L-2. Corresponding SNOMED Terms for Large Animals

SNOMED Code Value

Code Meaning

Body Part Examined

T-D4000

Abdomen

ABDOMEN

T-D8030

All legs

LEGS

T-1531B

Atlantal-axial joint

ATLANTOAXIAL

T-15311

Atlanto-occipital joint

ATLANTOOCCIPITAL

T-74000

Bladder

BLADDER

T-12771

Calcaneal tubercle

T-D8600

Carpus

CARPUS

T-11501

Cervical spine

CSPINE

T-D00F7

Cervico-thoracic spine

CTSPINE

T-D3000

Chest

CHEST

R-FAB55

Chest and Abdomen

CHESTABDOMEN

T-11B02

Coccygeal vertrebrae

TAIL

T-59300

Colon

COLON

T-D0310

Digit

DIGIT

T-110A2

Distal phalanx

DISTALPHALANX

T-15430

Elbow joint

ELBOW

T-D0010

Entire body

WHOLEBODY

T-56000

Esophagus

ESOPHAGUS

T-12710

Femur

FEMUR

T-D8640

Fetlock of forelimb

FOREFETLOCK

T-D9540

Fetlock of hindlimb

HINDFETLOCK

T-12750

Fibula

FIBULA

T-D04F2

Forefoot

FOREFOOT

T-22200

Frontal sinus

FRONTALSINUS

T-D9713

Hindfoot

HINDFOOT

T-15710

Hip joint

HIP

T-12410

Humerus

HUMERUS

T-11503

Lumbar spine

LSPINE

T-D00F9

Lumbo-sacral spine

LSSPINE

T-11180

Mandible

JAW

T-54170

Mandibular dental arch

T-540EE

Mandibular incisor teeth

T-54160

Maxillary dental arch

T-540ED

Maxillary incisor teeth

T-1254D

Metacarpus

METACARPUS

T-12847

Metatarsus

METATARSUS

T-22000

Nasal sinus

T-12450

Navicular of forefoot

FORENAVICULAR

T-127EC

Navicular of hindfoot

HINDNAVICULAR

T-D14AD

Orbital region

T-D8650

Pastern of forefoot

FOREPASTERN

T-D9550

Pastern of hindfoot

HINDPASTERN

T-12730

Patella

PATELLA

T-D6000

Pelvis

PELVIS

T-12420

Radius

RADIUS

T-12403

Radius and ulna

RADIUSULNA

T-11AD0

Sacrum

SSPINE

T-D2220

Shoulder

SHOULDER

T-11100

Skull

SKULL

T-15728

Stiffle

STIFLE

T-12761

Tarsus

TARSUS

T-11502

Thoracic spine

TSPINE

T-D00F8

Thoraco-lumbar spine

TLSPINE

T-12740

Tibia

TIBIA

T-12701

Tibia and fibula

TIBIAFIBULA

T-50110

Upper gastro-intestinal tract

UGITRACT

T-12430

Ulna

ULNA

T-75000

Urethra

URETHRA

T-7000C

Urinary tract

URINARYTRACT

T-D8040

Wing

WING


Note

In prior versions of this table, different codes were used for some concepts; see PS3.16-2011.

Table L-3. Corresponding Codes for Small Animal Use

SNOMED Code Value

Code Meaning

Body Part Examined

SNOMED-CT Concept ID

FMA ID

Mouse Anatomy ID

NCIt ID

Uberon ID

UMLS Concept UniqueID

T-B3000

Adrenal gland

ADRENAL

23451007

9604

0000116

C12666

0002369

C0001625

T-15750

Ankle joint

ANKLE

70258002

35195

0000463

C32078

0001488

C0003087

T-42000

Aorta

AORTA

15825003

3734

0000062

C12669

0000947

C0003483

T-74000

Bladder

BLADDER

89837001

15900

0000380

C12414

0001255

C0005682

T-A0100

Brain

BRAIN

12738006

50801

0000168

C12439

0000955

C0006104

T-04000

Breast

BREAST

76752008

57983

0000145

C12367

0001911

C0929301

T-26000

Bronchus

BRONCHUS

955009

7409

0000436

C12683

0002185

C0006255

T-D1206

Buccal region of face

CHEEK

60819002

46476

0002475

C13070

0001567

C0007966

T-12770

Calcaneus

CALCANEUS

80144004

24496

0001348

C32250

0001450

C0006655

T-45010

Carotid Artery

CAROTID

69105007

0001925

C12687

0005396

C0007272

T-A6000

Cerebellum

CEREBELLUM

113305005

67944

0000198

C12445

0002037

C0007765

T-83200

Cervix

CERVIX

71252005

17740

0000392

C12311

0000002

C0007874

T-12310

Clavicle

CLAVICLE

51299004

13321

0001329

C12695

0001105

C0008913

T-11BF0

Coccyx

COCCYX

64688005

20229

0001420

C12696

0001095

C0009194

T-59300

Colon

COLON

71854001

14543

0000335

C12382

0001155

C0009368

T-AA200

Cornea

CORNEA

28726007

58238

0000266

C12342

0000964

C0010031

T-43000

Coronary artery

CORONARYARTERY

41801008

49893

0002453

C12843

0001621

C0205042

T-D0310

Digit

DIGIT

82680008

85518

0000690

C40186

0002544

C0582802

T-58200

Duodenum

DUODENUM

38848004

7206

0000338

C12263

0002114

C0013303

T-15430

Elbow joint

ELBOW

16953009

35289

0000451

C32497

0001490

C0013770

T-56000

Esophagus

ESOPHAGUS

32849002

7131

0000352

C12389

0001043

C0014876

T-D0300

Extremity

EXTREMITY

66019005

7182

0000007

C12429

0002101

C0015385

T-AA000

Eye

EYE

81745001

54448

0000261

C12401

0000019

C0015392

T-AA810

Eyelid

EYELID

80243003

54437

0000268

C12713

0001711

C0015426

T-D1200

Face

FACE

89545001

24728

0002473

C13071

0001456

C0015450

T-12710

Femur

FEMUR

71341001

9611

0001359

C12717

0000981

C0015811

T-12750

Fibula

FIBULA

87342007

24479

0001360

C12718

0001446

C0016068

T-D8800

Finger

FINGER

7569003

9666

0000041

C32608

0002389

C0016129

T-D9700

Foot

FOOT

56459004

9664

0000044

C32622

0002387

C0016504

T-22200

Frontal sinus

FRONTALSINUS

55060009

57417

0001793

C12277

0001760

C0016734

T-63000

Gallbladder

GALLBLADDER

28231008

7202

0000356

C12377

0002110

C0016976

T-D8700

Hand

HAND

85562004

9712

0000037

C32712

0002398

C0018563

T-D1100

Head

HEAD

69536005

7154

0000023

C12419

0000033

C0018670

T-D1000

Head and Neck

HEADNECK

774007

0000006

C12418

0007811

C0460004

T-32000

Heart

HEART

80891009

7088

0000072

C12727

0000948

C0018787

T-15710

Hip joint

HIP

24136001

35178

0000470

C32742

0001486

C0019558

T-12410

Humerus

HUMERUS

85050009

13303

0001356

C12731

0000976

C0020164

T-58600

Ileum

ILEUM

34516001

7208

0000339

C12387

0002116

C0020885

T-12340

Ilium

ILIUM

22356005

16589

0001336

C32765

0001273

C0020889

T-D1213

Jaw region

JAW

661005

54396

0001905

C48821

0001708

C0022359

T-58400

Jejunum

JEJUNUM

21306003

7207

0000340

C12388

0002115

C0022378

T-71000

Kidney

KIDNEY

64033007

7203

0000368

C12415

0002113

C0022646

T-62000

Liver

LIVER

10200004

7197

0000358

C12392

0002107

C0023884

T-D9400

Lower leg

LEG

30021000

24979

0000047

C32974

0000978

C1140621

T-28000

Lung

LUNG

39607008

7195

0000415

C12468

0002048

C0024109

T-11180

Mandible

JAW

91609006

52748

0001487

C12290

0001684

C0024687

T-11170

Maxilla

MAXILLA

70925003

9711

0001491

C26470

0002397

C0024947

T-12450

Navicular of forefoot

FORENAVICULAR

30518006

33311

0002555

C12854

0001427

C0223724

T-D1600

Neck

NECK

45048000

7155

0000024

C13063

0000974

C0027530

T-D14AE

Orbital structure

ORBIT

363654007

53074

0002482

C12347

0001697

C0029180

T-87000

Ovary

OVARY

15497006

7209

0000384

C12404

0000992

C0029939

T-65000

Pancreas

PANCREAS

15776009

7198

0000120

C12393

0001264

C0030274

T-61100

Parotid gland

PAROTID

45289007

59790

0001585

C12427

0001831

C0030580

T-12730

Patella

PATELLA

64234005

24485

0001374

C33282

0002446

C0030647

T-D6000

Pelvis

PELVIS

12921003

9578

0000030

C12767

0002355

C0030797

T-91000

Penis

PENIS

18911002

9707

0000408

C12409

0000989

C0030851

T-55000

Pharynx

PHARYNX

54066008

46688

0000432

C12425

0001042

C0031354

T-12420

Radius

RADIUS

62413002

23463

0001357

C12777

0001423

C0034627

T-59600

Rectum

RECTUM

34402009

14544

0000336

C12390

0001052

C0034896

T-11300

Rib

RIB

113197003

7574

0000315

C12782

0002228

C0035561

T-12280

Scapula

SCAPULA

79601000

13394

0001330

C12783

0006849

C0036277

T-AA110

Sclera

SCLERA

18619003

58269

0000280

C12784

0001773

C0036410

T-98000

Scrotum

SCROTUM

20233005

18252

0000409

C12785

0001300

C0036471

T-D2220

Shoulder

SHOULDER

16982005

25202

0000038

C25203

0001467

C0037004

T-11100

Skull

SKULL

89546000

46565

0000316

C12789

0003128

C0037303

T-C3000

Spleen

SPLEEN

78961009

7196

0000141

C12432

0002106

C0037993

T-11210

Sternum

STERNUM

56873002

7485

0001331

C12793

0000975

C0038293

T-15290

Temporomandibular joint

TMJ

53620006

54832

0002899

C32888

0003700

C0039493

T-94000

Testis

TESTIS

40689003

7210

0000411

C12412

0000473

C0039597

T-D9100

Thigh

THIGH

68367000

24967

0000052

C33763

0000376

C0039866

T-D8810

Thumb

THUMB

76505004

24938

0000454

C52834

0001463

C0040067

T-C8000

Thymus

THYMUS

9875009

9607

0000142

C12433

0002370

C0040113

T-B6000

Thyroid

THYROID

69748006

9603

0000129

C12400

0002046

C0040132

T-12740

Tibia

TIBIA

12611008

24476

0001361

C12800

0000979

C0040184

T-D9800

Toe

TOE

29707007

25046

0000048

C33788

0001466

C0040357

T-53000

Tongue

TONGUE

21974007

54640

0000347

C12422

0001723

C0040408

T-12430

Ulna

ULNA

23416004

23466

0001358

C12809

0001424

C0041600

T-D8200

Upper arm

ARM

40983000

24890

0000033

C32141

0001460

C0446516

T-73000

Ureter

URETER

87953007

9704

0000378

C12416

0000056

C0041951

T-75000

Urethra

URETHRA

13648007

19667

0000379

C12417

0000057

C0041967

T-83000

Uterus

UTERUS

35039007

17558

0000389

C12405

0000995

C0042149

T-82000

Vagina

VAGINA

76784001

19949

0000394

C12407

0000996

C0042232

T-81000

Vulva

VULVA

45292006

20462

0000395

C12408

0000997

C0042993


Note

Since the Adult Mouse Anatomy Ontology is not in the UMLS, the mapping of Mouse Anatomy codes described here is an extract of a mapping to the NCI Thesaurus described in Hayamizu TF, de Coronado S, Fragoso G, Sioutos N, Kadin JA, Ringwald M. The mouse–human anatomy ontology mapping project. Database: The Journal of Biological Databases and Curation 2012;2012:bar066. doi:10.1093/database/bar066 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308156/. The mapping files used can be found at ftp://ftp.informatics.jax.org/pub/reports/ma2ncit.obo.

The NCI Thesaurus codes were then used to look up corresponding concepts in UMLS, from which SNOMED and FMA codes were extracted automatically (and various conflicts and ambiguities resolved manually). The same correspondence to existing Body Part Examined values is used as in other tables in this Annex.

Another mapping project using the FMA as a reference ontology was not used, since the files were not available. See Zhang S, Bodenreider O. Alignment of Multiple Ontologies of Anatomy: Deriving Indirect Mappings from Direct Mappings to a Reference. AMIA Annual Symposium Proceedings 2005;2005:864-868 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1560629/.

Table L-4. Correspondence between Animal-specific and Generic NCI Thesaurus Codes

Code Meaning

Generic NCIt ID

Generic UMLS Concept UniqueID

Mouse-specific NCIt ID

Mouse-specific UMLS Concept UniqueID

Rat-specific NCIt ID

Rat-specific UMLS Concept UniqueID

Adrenal gland

C12666

C0001625

C22635

C1515888

C60540

C1882555

Ankle joint

C32078

C0003087

Aorta

C12669

C0003483

C23600

C60541

C1882561

Bladder

C12414

C0005682

C22729

C1511191

C60634

C1882899

Brain

C12439

C0006104

C22606

C1521713

C60544

C1882598

Breast

C12367

C0929301

C22549

C1512980

C60585

C1882771

Bronchus

C12683

C0006255

C24050

C1518036

C60546

C1882603

Buccal region of face

C13070

C0007966

C23972

Calcaneus

C32250

C0006655

Carotid Artery

C12687

C0007272

C23618

Cerebellum

C12445

C0007765

C22609

C1522278

C60550

C1882617

Cervix

C12311

C0007874

C60635

C1882903

Clavicle

C12695

C0008913

C23626

Coccyx

C12696

C0009194

Colon

C12382

C0009368

C22528

C1522281

C60554

C1882628

Cornea

C12342

C0010031

C22717

C2700413

Coronary artery

C12843

C0205042

C23773

Digit

C40186

C0582802

Duodenum

C12263

C0013303

C22523

C1522711

C60558

C1882648

Elbow joint

C32497

C0013770

Esophagus

C12389

C0014876

C22509

C1516967

C60563

C1882662

Extremity

C12429

C0015385

C23363

Eye

C12401

C0015392

C22711

C1517081

C60565

C1882665

Eyelid

C12713

C0015426

C23644

C60566

C1882666

Face

C13071

C0015450

C23973

Femur

C12717

C0015811

C23648

C60567

C1882669

Fibula

C12718

C0016068

C23649

Finger

C32608

C0016129

Foot

C32622

C0016504

Frontal sinus

C12277

C0016734

C23210

Gallbladder

C12377

C0016976

C23312

Hand

C32712

C0018563

Head

C12419

C0018670

C23353

Head and Neck

C12418

C0460004

C23352

Heart

C12727

C0018787

C22498

C1512359

C60571

C1882687

Hip joint

C32742

C0019558

Humerus

C12731

C0020164

C23662

Ileum

C12387

C0020885

C22525

C1522516

C60573

C1882700

Ilium

C32765

C0020889

Jaw region

C48821

C0022359

C22683

C1511239

Jejunum

C12388

C0022378

C22524

C1522714

C60575

C1882710

Kidney

C12415

C0022646

C22730

C1517673

C60577

C1882714

Liver

C12392

C0023884

C22515

C1517914

C60581

C1882726

Lower leg

C32974

C1140621

Lung

C12468

C0024109

C22600

C1518039

C60582

C1882727

Mandible

C12290

C0024687

C23223

Maxilla

C26470

C0024947

Navicular of forefoot

C12854

C0223724

Neck

C13063

C0027530

C23965

Orbital structure

C12347

C0029180

C23282

C60594

C1882803

Ovary

C12404

C0029939

C22656

C1518753

C60595

C1882808

Pancreas

C12393

C0030274

C24044

C1518865

C60597

C1882810

Parotid gland

C12427

C0030580

C22504

C1527051

C60600

C1882814

Patella

C33282

C0030647

Pelvis

C12767

C0030797

C23698

Penis

C12409

C0030851

C22172

C1518951

Pharynx

C12425

C0031354

C22507

C1519041

Radius

C12777

C0034627

C23708

Rectum

C12390

C0034896

C22532

C1522513

C60609

C1882833

Rib

C12782

C0035561

C23713

Scapula

C12783

C0036277

C23714

Sclera

C12784

C0036410

C23715

Scrotum

C12785

C0036471

C22176

C1519206

Shoulder

C25203

C0037004

Skull

C12789

C0037303

C22684

C1522418

Spleen

C12432

C0037993

C22556

C1519474

C60621

C1882867

Sternum

C12793

C0038293

C23724

C60622

C1882873

Temporomandibular joint

C32888

C0039493

Testis

C12412

C0039597

C22178

C1515315

C60625

C1882878

Thigh

C33763

C0039866

Thumb

C52834

C0040067

Thymus

C12433

C0040113

C22553

C1515438

C60627

C1882880

Thyroid

C12400

C0040132

C22650

C1522142

C60628

C1882881

Tibia

C12800

C0040184

C23731

Toe

C33788

C0040357

Tongue

C12422

C0040408

C22508

C1519545

C60629

C1882882

Ulna

C12809

C0041600

C23740

Upper arm

C32141

C0446516

Ureter

C12416

C0041951

C22738

C1519822

C60632

C1882897

Urethra

C12417

C0041967

C22739

C1519824

C60633

C1882898

Uterus

C12405

C0042149

C22671

C1519876

C60636

C1882904

Vagina

C12407

C0042232

C22676

C1519910

C60637

C1882906

Vulva

C12408

C0042993

C22677

C1520067


Note

For the mouse, NCIt contains some duplicate anatomical concepts, including those which have been marked inactive and appear to have been replaced with improved codes for the "Mouse Models of Human Cancers Consortium" (MMHCC). Whenever duplicates were found, the MMHCC concept has been used in this table.

This table was produced by searching NCIt for all concepts that had "mouse" or "rat" in their concept name or synonyms, and then using that synonym with the word "mouse" or "rat" removed, to match against generic concept names.

The NCI Thesaurus codes were then used to look up corresponding concepts in UMLS, though not all of the concepts are included in UMLS yet (especially the MMHCC concepts).

DICOM PS3.16 2016c - Content Mapping Resource