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L Correspondence of Anatomic Region Codes and Body Part Examined Defined Terms
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# L Correspondence of Anatomic Region Codes and Body Part Examined Defined Terms

This Annex defines a correspondence between the codes used in context groups for Anatomic Region Sequence (0008,2218) and Body Part Examined (0018,0015), as well as providing a list of the Defined Terms for Body Part Examined (0018,0015), for human use in Table L-1 and for large animal use in Table L-2 and for small animal use in Table L-3.

Table L-1. Corresponding SNOMED Terms for Human Use

SNOMED Code Value | Code Meaning | Body Part Examined
--- | --- | ---
T-D4000 | Abdomen | ABDOMEN
R-FAB57 | Abdomen and Pelvis | ABDOMENPELVIS
T-42500 | Abdominal aorta |
T-15420 | Acromioclavicular joint |
T-B3000 | Adrenal gland | ADRENAL
T-15750 | Ankle joint | ANKLE
T-48503 | Anomalous pulmonary vein |
T-49215 | Antecubital vein |
T-48440 | Anterior cardiac vein |
T-45530 | Anterior communicating artery |
T-45730 | Anterior spinal artery |
T-47700 | Anterior tibial artery |
T-59490 | Anus, rectum and sigmoid colon |
T-42000 | Aorta | AORTA
T-42300 | Aortic arch |
D3-81922 | Aortic fistula |
T-32602 | Apex of left ventricle |
T-280A0 | Apex of Lung |
T-32502 | Apex of right ventricle |
T-41000 | Artery |
T-42100 | Ascending aorta |
T-32100 | Atrium |
T-D8104 | Axilla | AXILLA
T-47100 | Axillary Artery |
T-49110 | Axillary vein |
T-48340 | Azygos vein |
T-D2100 | Back | BACK
A-00203 | Baffle |
T-45800 | Basilar artery |
T-60610 | Bile duct |
T-74000 | Bladder | BLADDER
T-DD123 | Bladder and urethra |
T-D00AB | Body conduit |
T-49424 | Boyd's perforating vein |
T-47160 | Brachial artery |
T-49350 | Brachial vein |
T-A0100 | Brain | BRAIN
T-04000 | Breast | BREAST
T-D6500 | Broad ligament |
T-26000 | Bronchus | BRONCHUS
T-D1206 | Buccal region of face |
T-D2600 | Buttock | BUTTOCK
T-12770 | Calcaneus | CALCANEUS
T-D9440 | Calf of leg | CALF
T-72100 | Calyx |
T-45010 | Carotid Artery | CAROTID
T-49240 | Cephalic vein |
T-A6000 | Cerebellum | CEREBELLUM
T-45510 | Cerebral artery |
T-11501 | Cervical spine | CSPINE
T-D00F7 | Cervico-thoracic spine | CTSPINE
T-83200 | Cervix | CERVIX
T-D1206 | Cheek | CHEEK
T-D3000 | Chest | CHEST
R-FAB55 | Chest and Abdomen | CHESTABDOMEN
R-FAB56 | Chest, Abdomen and Pelvis | CHESTABDPELVIS
T-45526 | Circle of Willis | CIRCLEOFWILLIS
T-12310 | Clavicle | CLAVICLE
T-11BF0 | Coccyx | COCCYX
T-59300 | Colon | COLON
D4-31005 | Common atrium |
T-45100 | Common carotid artery |
T-46710 | Common iliac artery |
T-48920 | Common iliac vein |
D4-31120 | Common ventricle |
D4-32504 | Congenital coronary artery fistula to left atrium |
D4-32506 | Congenital coronary artery fistula to left ventricle |
D4-32509 | Congenital coronary artery fistula to right atrium |
D4-32510 | Congenital coronary artery fistula to right ventricle |
D3-40208 | Congenital pulmonary arteriovenous fistula |
T-AA200 | Cornea | CORNEA
T-43000 | Coronary artery | CORONARYARTERY
T-48410 | Coronary sinus |
T-A0193 | Cranial venous system |
T-42400 | Descending aorta |
T-49429 | Dodd's perforating vein |
T-58200 | Duodenum | DUODENUM
T-AB000 | Ear | EAR
T-15430 | Elbow joint | ELBOW
T-41000 | Endo-arterial |
T-32000 | Endo-cardiac |
T-56000 | Endo-esophageal |
T-21300 | Endo-nasal |
T-23050 | Endo-nasopharyngeal |
T-59600 | Endo-rectal |
T-71000 | Endo-renal |
T-73000 | Endo-ureteric |
T-75000 | Endo-urethral |
T-82000 | Endo-vaginal |
T-40000 | Endo-vascular |
T-48000 | Endo-venous |
T-74250 | Endo-vesical |
T-D0010 | Entire body | WHOLEBODY
T-D4200 | Epigastric region |
T-56000 | Esophagus | ESOPHAGUS
T-DD163 | Esophagus, stomach and duodenum |
T-AB200 | External auditory canal |
T-45200 | External carotid artery |
T-46910 | External iliac artery |
T-48930 | External iliac vein |
T-D0300 | Extremity | EXTREMITY
T-AA000 | Eye | EYE
T-AA810 | Eyelid | EYELID
T-D1200 | Face | FACE
T-45240 | Facial artery |
T-11196 | Facial bones |
T-47400 | Femoral artery |
T-49410 | Femoral vein |
T-12710 | Femur | FEMUR
T-D8800 | Finger | FINGER
T-D2310 | Flank |
T-15200 | Fontanel of skull |
T-D9700 | Foot | FOOT
T-D8500 | Forearm |
T-63000 | Gallbladder | GALLBLADDER
T-48820 | Gastric vein |
T-47490 | Genicular artery |
T-D2600 | Gluteal region |
T-48420 | Great cardiac vein |
T-D8700 | Hand | HAND
T-D1100 | Head | HEAD
T-D1000 | Head and Neck | HEADNECK
T-32000 | Heart | HEART
T-46420 | Hepatic artery |
T-48720 | Hepatic vein |
T-15710 | Hip joint | HIP
T-12410 | Humerus | HUMERUS
T-4942A | Hunterian perforating vein |
T-D4240 | Hypogastric region |
T-D161E | Submental |
T-55300 | Hypopharynx |
T-58600 | Ileum | ILEUM
T-41068 | Iliac and/or femoral artery |
T-46700 | Iliac artery |
T-12340 | Ilium | ILIUM
T-48470 | Inferior cardiac vein |
T-48540 | Inferior left pulmonary vein |
T-46520 | Inferior mesenteric artery |
T-48520 | Inferior right pulmonary vein |
T-48710 | Inferior vena cava |
T-D7000 | Inguinal region |
T-46010 | Innominate artery |
T-48620 | Innominate vein |
T-AB959 | Internal Auditory Canal | IAC
T-45300 | Internal carotid artery |
T-46740 | Internal iliac artery |
T-48170 | Internal jugular vein |
T-46200 | Internal mammary artery |
T-D4010 | Intra-abdominal |
G-A15A | Intra-articular |
T-56000 | Intra-esophageal |
T-D6221 | Intra-pelvic |
T-D3000 | Intra-thoracic |
T-D1400 | Intracranial |
T-D1213 | Jaw region | JAW
T-58400 | Jejunum | JEJUNUM
T-15001 | Joint |
D4-31052 | Juxtaposed atrial appendage |
T-71000 | Kidney | KIDNEY
T-D9200 | Knee | KNEE
T-45410 | Lacrimal artery |
T-45416 | Lacrimal artery of right eye |
T-59000 | Large intestine |
T-24100 | Larynx | LARYNX
T-32300 | Left atrium |
T-32310 | Left auricular appendage |
T-47420 | Left femoral artery |
T-D4211 | Left hypochondriac region |
T-D7020 | Left inguinal region |
T-D4140 | Left lower quadrant of abdomen |
T-D2340 | Left lumbar region |
T-44400 | Left pulmonary artery |
T-D4130 | Left upper quadrant of abdomen |
T-32600 | Left ventricle |
T-32640 | Left ventricle inflow |
D4-31022 | Left ventricle outflow chamber |
T-32650 | Left ventricle outflow tract |
T-45230 | Lingual artery |
T-62000 | Liver | LIVER
T-04003 | Lower inner quadrant of breast |
T-D9400 | Lower leg | LEG
T-04005 | Lower outer quadrant of breast |
T-46960 | Lumbar artery |
T-D2300 | Lumbar region |
T-11503 | Lumbar spine | LSPINE
T-D00F9 | Lumbo-sacral spine | LSSPINE
T-40230 | Lumen of blood vessel |
T-28000 | Lung | LUNG
T-11180 | Mandible | JAW
T-11133 | Mastoid bone |
T-11170 | Maxilla | MAXILLA
T-D3300 | Mediastinum | MEDIASTINUM
T-46500 | Mesenteric artery |
T-4884A | Mesenteric vein |
T-51000 | Mouth | MOUTH
T-11149 | Nasal bone |
T-2300C | Nasopharynx |
T-D1600 | Neck | NECK
R-FAB52 | Neck and Chest | NECKCHEST
R-FAB53 | Neck, Chest and Abdomen | NECKCHESTABDOMEN
R-FAB54 | Neck, Chest, Abdomen and Pelvis | NECKCHESTABDPELV
T-21000 | Nose | NOSE
T-45250 | Occipital artery |
T-48214 | Occipital vein |
T-D4450 | Omental bursa |
T-D4600 | Omentum |
T-45400 | Ophthalmic artery |
T-11102 | Optic canal |
T-D14AE | Orbital structure | ORBIT
T-87000 | Ovary | OVARY
T-65000 | Pancreas | PANCREAS
T-65010 | Pancreatic duct |
T-65600 | Pancreatic duct and bile duct systems |
T-22000 | Paranasal sinus |
T-D3136 | Parasternal |
T-B7000 | Parathyroid |
T-61100 | Parotid gland | PAROTID
T-12730 | Patella | PATELLA
D4-32012 | Patent ductus arteriosus |
T-D6000 | Pelvis | PELVIS
R-FAB58 | Pelvis and lower extremities |
T-91000 | Penis | PENIS
T-D2700 | Perineum |
T-47630 | Peroneal artery |
T-55000 | Pharynx | PHARYNX
T-20101 | Pharynx and larynx |
T-47500 | Popliteal artery |
T-D9310 | Popliteal fossa |
T-48810 | Portal vein |
T-45320 | Posterior communicating artery |
T-49535 | Posterior medial tributary |
T-47600 | Posterior tibial artery |
T-F7001 | Primitive aorta |
T-F7040 | Primitive pulmonary artery |
T-9200B | Prostate | PROSTATE
T-44000 | Pulmonary artery |
D4-33142 | Pulmonary artery conduit |
T-32190 | Pulmonary chamber of cor triatriatum |
T-48581 | Pulmonary vein |
D4-33512 | Pulmonary vein confluence |
D4-33514 | Pulmonary venous atrium |
T-47300 | Radial artery |
T-12420 | Radius | RADIUS
T-12403 | Radius and ulna | RADIUSULNA
T-59600 | Rectum | RECTUM
T-46600 | Renal artery |
T-72000 | Renal pelvis |
T-48740 | Renal vein |
T-D4900 | Retroperitoneum |
T-11300 | Rib | RIB
T-32200 | Right atrium |
T-32210 | Right auricular appendage |
T-47410 | Right femoral artery |
T-D4212 | Right hypochondriac region |
T-D7010 | Right inguinal region |
T-D4120 | Right lower quadrant of abdomen |
T-D2342 | Right lumbar region |
T-44200 | Right pulmonary artery |
T-D4110 | Right upper quadrant of abdomen |
T-32500 | Right ventricle |
T-32540 | Right ventricle inflow |
D4-31032 | Right ventricle outflow chamber |
T-32550 | Right ventricle outflow tract |
T-15680 | Sacroiliac joint |
T-11AD0 | Sacrum | SSPINE
T-D930A | Saphenofemoral junction |
T-49530 | Saphenous vein |
T-D1160 | Scalp | SCALP
T-12280 | Scapula | SCAPULA
T-AA110 | Sclera | SCLERA
T-98000 | Scrotum | SCROTUM
T-D1460 | Sella turcica |
T-12980 | Sesamoid bones of foot |
T-D2220 | Shoulder | SHOULDER
T-59470 | Sigmoid colon |
T-11100 | Skull | SKULL
T-58000 | Small intestine |
T-A7010 | Spinal cord |
T-D04FF | Spine | SPINE
T-C3000 | Spleen | SPLEEN
T-46460 | Splenic artery |
T-48890 | Splenic vein |
T-15610 | Sternoclavicular joint |
T-11210 | Sternum | STERNUM
T-57000 | Stomach | STOMACH
T-46100 | Subclavian artery |
T-48330 | Subclavian vein |
T-D4210 | Subcostal |
T-D1603 | Submandibular area |
T-61300 | Submandibular gland | SUBMANDIBULAR
T-D3213 | Subxiphoid |
T-45270 | Superficial temporal artery |
T-48530 | Superior left pulmonary vein |
T-46510 | Superior mesenteric artery |
T-48510 | Superior right pulmonary vein |
T-45210 | Superior thyroid artery |
T-48610 | Superior vena cava |
T-D1620 | Supraclavicular region of neck |
T-D4240 | Suprapubic region |
T-11218 | Suprasternal notch |
T-44007 | Systemic collateral artery to lung |
D4-33516 | Systemic venous atrium |
T-15770 | Tarsal joint |
T-15290 | Temporomandibular joint | TMJ
T-94000 | Testis | TESTIS
T-D9100 | Thigh | THIGH
T-42070 | Thoracic aorta |
T-11502 | Thoracic spine | TSPINE
T-D00F8 | Thoraco-lumbar spine | TLSPINE
T-D3000 | Thorax |
T-D8810 | Thumb | THUMB
T-C8000 | Thymus | THYMUS
T-B6000 | Thyroid | THYROID
T-12740 | Tibia | TIBIA
T-12701 | Tibia and fibula | TIBIAFIBULA
T-D9800 | Toe | TOE
T-53000 | Tongue | TONGUE
T-25000 | Trachea | TRACHEA
T-DD006 | Trachea and bronchus |
D4-31400 | Truncus arteriosus communis |
T-46400 | Truncus coeliacus |
T-12430 | Ulna | ULNA
T-47200 | Ulnar artery |
T-F1810 | Umbilical artery |
T-D4230 | Umbilical region |
T-48817 | Umbilical vein |
T-D8200 | Upper arm | ARM
T-04002 | Upper inner quadrant of breast |
T-04004 | Upper outer quadrant of breast |
T-7000B | Upper urinary tract |
T-73000 | Ureter | URETER
T-75000 | Urethra | URETHRA
T-83000 | Uterus | UTERUS
T-88920 | Uterus and fallopian tubes |
T-82000 | Vagina | VAGINA
A-04140 | Vascular graft |
T-48000 | Vein |
T-48003 | Venous network |
T-32400 | Ventricle |
T-45700 | Vertebral artery |
T-11011 | Vertebral column and cranium |
T-81000 | Vulva | VULVA
T-15460 | Wrist joint | WRIST
T-11166 | Zygoma | ZYGOMA

### Note

In prior versions of this table, different codes were used for some concepts; see PS3.16-2011.

Table L-2. Corresponding SNOMED Terms for Large Animals

SNOMED Code Value | Code Meaning | Body Part Examined
--- | --- | ---
T-D4000 | Abdomen | ABDOMEN
T-D8030 | All legs | LEGS
T-1531B | Atlantal-axial joint | ATLANTOAXIAL
T-15311 | Atlanto-occipital joint | ATLANTOOCCIPITAL
T-74000 | Bladder | BLADDER
T-12771 | Calcaneal tubercle |
T-D8600 | Carpus | CARPUS
T-11501 | Cervical spine | CSPINE
T-D00F7 | Cervico-thoracic spine | CTSPINE
T-D3000 | Chest | CHEST
R-FAB55 | Chest and Abdomen | CHESTABDOMEN
T-11B02 | Coccygeal vertrebrae | TAIL
T-59300 | Colon | COLON
T-D0310 | Digit | DIGIT
T-110A2 | Distal phalanx | DISTALPHALANX
T-15430 | Elbow joint | ELBOW
T-D0010 | Entire body | WHOLEBODY
T-56000 | Esophagus | ESOPHAGUS
T-12710 | Femur | FEMUR
T-D8640 | Fetlock of forelimb | FOREFETLOCK
T-D9540 | Fetlock of hindlimb | HINDFETLOCK
T-12750 | Fibula | FIBULA
T-D04F2 | Forefoot | FOREFOOT
T-22200 | Frontal sinus | FRONTALSINUS
T-D9713 | Hindfoot | HINDFOOT
T-15710 | Hip joint | HIP
T-12410 | Humerus | HUMERUS
T-11503 | Lumbar spine | LSPINE
T-D00F9 | Lumbo-sacral spine | LSSPINE
T-11180 | Mandible | JAW
T-54170 | Mandibular dental arch |
T-540EE | Mandibular incisor teeth |
T-54160 | Maxillary dental arch |
T-540ED | Maxillary incisor teeth |
T-1254D | Metacarpus | METACARPUS
T-12847 | Metatarsus | METATARSUS
T-22000 | Nasal sinus |
T-12450 | Navicular of forefoot | FORENAVICULAR
T-127EC | Navicular of hindfoot | HINDNAVICULAR
T-D14AD | Orbital region |
T-D8650 | Pastern of forefoot | FOREPASTERN
T-D9550 | Pastern of hindfoot | HINDPASTERN
T-12730 | Patella | PATELLA
T-D6000 | Pelvis | PELVIS
T-12420 | Radius | RADIUS
T-12403 | Radius and ulna | RADIUSULNA
T-11AD0 | Sacrum | SSPINE
T-D2220 | Shoulder | SHOULDER
T-11100 | Skull | SKULL
T-15728 | Stiffle | STIFLE
T-12761 | Tarsus | TARSUS
T-11502 | Thoracic spine | TSPINE
T-D00F8 | Thoraco-lumbar spine | TLSPINE
T-12740 | Tibia | TIBIA
T-12701 | Tibia and fibula | TIBIAFIBULA
T-50110 | Upper gastro-intestinal tract | UGITRACT
T-12430 | Ulna | ULNA
T-75000 | Urethra | URETHRA
T-7000C | Urinary tract | URINARYTRACT
T-D8040 | Wing | WING

### Note

In prior versions of this table, different codes were used for some concepts; see PS3.16-2011.

Table L-3. Corresponding Codes for Small Animal Use

SNOMED Code Value | Code Meaning | Body Part Examined | SNOMED-CT Concept ID | FMA ID | Mouse Anatomy ID | NCIt ID | Uberon ID | UMLS Concept UniqueID
--- | --- | --- | --- | --- | --- | --- | --- | ---
T-B3000 | Adrenal gland | ADRENAL | 23451007 | 9604 | 0000116 | C12666 | 0002369 | C0001625
T-15750 | Ankle joint | ANKLE | 70258002 | 35195 | 0000463 | C32078 | 0001488 | C0003087
T-42000 | Aorta | AORTA | 15825003 | 3734 | 0000062 | C12669 | 0000947 | C0003483
T-74000 | Bladder | BLADDER | 89837001 | 15900 | 0000380 | C12414 | 0001255 | C0005682
T-A0100 | Brain | BRAIN | 12738006 | 50801 | 0000168 | C12439 | 0000955 | C0006104
T-04000 | Breast | BREAST | 76752008 | 57983 | 0000145 | C12367 | 0001911 | C0929301
T-26000 | Bronchus | BRONCHUS | 955009 | 7409 | 0000436 | C12683 | 0002185 | C0006255
T-D1206 | Buccal region of face | CHEEK | 60819002 | 46476 | 0002475 | C13070 | 0001567 | C0007966
T-12770 | Calcaneus | CALCANEUS | 80144004 | 24496 | 0001348 | C32250 | 0001450 | C0006655
T-45010 | Carotid Artery | CAROTID | 69105007 |  | 0001925 | C12687 | 0005396 | C0007272
T-A6000 | Cerebellum | CEREBELLUM | 113305005 | 67944 | 0000198 | C12445 | 0002037 | C0007765
T-83200 | Cervix | CERVIX | 71252005 | 17740 | 0000392 | C12311 | 0000002 | C0007874
T-12310 | Clavicle | CLAVICLE | 51299004 | 13321 | 0001329 | C12695 | 0001105 | C0008913
T-11BF0 | Coccyx | COCCYX | 64688005 | 20229 | 0001420 | C12696 | 0001095 | C0009194
T-59300 | Colon | COLON | 71854001 | 14543 | 0000335 | C12382 | 0001155 | C0009368
T-AA200 | Cornea | CORNEA | 28726007 | 58238 | 0000266 | C12342 | 0000964 | C0010031
T-43000 | Coronary artery | CORONARYARTERY | 41801008 | 49893 | 0002453 | C12843 | 0001621 | C0205042
T-D0310 | Digit | DIGIT | 82680008 | 85518 | 0000690 | C40186 | 0002544 | C0582802
T-58200 | Duodenum | DUODENUM | 38848004 | 7206 | 0000338 | C12263 | 0002114 | C0013303
T-15430 | Elbow joint | ELBOW | 16953009 | 35289 | 0000451 | C32497 | 0001490 | C0013770
T-56000 | Esophagus | ESOPHAGUS | 32849002 | 7131 | 0000352 | C12389 | 0001043 | C0014876
T-D0300 | Extremity | EXTREMITY | 66019005 | 7182 | 0000007 | C12429 | 0002101 | C0015385
T-AA000 | Eye | EYE | 81745001 | 54448 | 0000261 | C12401 | 0000019 | C0015392
T-AA810 | Eyelid | EYELID | 80243003 | 54437 | 0000268 | C12713 | 0001711 | C0015426
T-D1200 | Face | FACE | 89545001 | 24728 | 0002473 | C13071 | 0001456 | C0015450
T-12710 | Femur | FEMUR | 71341001 | 9611 | 0001359 | C12717 | 0000981 | C0015811
T-12750 | Fibula | FIBULA | 87342007 | 24479 | 0001360 | C12718 | 0001446 | C0016068
T-D8800 | Finger | FINGER | 7569003 | 9666 | 0000041 | C32608 | 0002389 | C0016129
T-D9700 | Foot | FOOT | 56459004 | 9664 | 0000044 | C32622 | 0002387 | C0016504
T-22200 | Frontal sinus | FRONTALSINUS | 55060009 | 57417 | 0001793 | C12277 | 0001760 | C0016734
T-63000 | Gallbladder | GALLBLADDER | 28231008 | 7202 | 0000356 | C12377 | 0002110 | C0016976
T-D8700 | Hand | HAND | 85562004 | 9712 | 0000037 | C32712 | 0002398 | C0018563
T-D1100 | Head | HEAD | 69536005 | 7154 | 0000023 | C12419 | 0000033 | C0018670
T-D1000 | Head and Neck | HEADNECK | 774007 |  | 0000006 | C12418 | 0007811 | C0460004
T-32000 | Heart | HEART | 80891009 | 7088 | 0000072 | C12727 | 0000948 | C0018787
T-15710 | Hip joint | HIP | 24136001 | 35178 | 0000470 | C32742 | 0001486 | C0019558
T-12410 | Humerus | HUMERUS | 85050009 | 13303 | 0001356 | C12731 | 0000976 | C0020164
T-58600 | Ileum | ILEUM | 34516001 | 7208 | 0000339 | C12387 | 0002116 | C0020885
T-12340 | Ilium | ILIUM | 22356005 | 16589 | 0001336 | C32765 | 0001273 | C0020889
T-D1213 | Jaw region | JAW | 661005 | 54396 | 0001905 | C48821 | 0001708 | C0022359
T-58400 | Jejunum | JEJUNUM | 21306003 | 7207 | 0000340 | C12388 | 0002115 | C0022378
T-71000 | Kidney | KIDNEY | 64033007 | 7203 | 0000368 | C12415 | 0002113 | C0022646
T-62000 | Liver | LIVER | 10200004 | 7197 | 0000358 | C12392 | 0002107 | C0023884
T-D9400 | Lower leg | LEG | 30021000 | 24979 | 0000047 | C32974 | 0000978 | C1140621
T-28000 | Lung | LUNG | 39607008 | 7195 | 0000415 | C12468 | 0002048 | C0024109
T-11180 | Mandible | JAW | 91609006 | 52748 | 0001487 | C12290 | 0001684 | C0024687
T-11170 | Maxilla | MAXILLA | 70925003 | 9711 | 0001491 | C26470 | 0002397 | C0024947
T-12450 | Navicular of forefoot | FORENAVICULAR | 30518006 | 33311 | 0002555 | C12854 | 0001427 | C0223724
T-D1600 | Neck | NECK | 45048000 | 7155 | 0000024 | C13063 | 0000974 | C0027530
T-D14AE | Orbital structure | ORBIT | 363654007 | 53074 | 0002482 | C12347 | 0001697 | C0029180
T-87000 | Ovary | OVARY | 15497006 | 7209 | 0000384 | C12404 | 0000992 | C0029939
T-65000 | Pancreas | PANCREAS | 15776009 | 7198 | 0000120 | C12393 | 0001264 | C0030274
T-61100 | Parotid gland | PAROTID | 45289007 | 59790 | 0001585 | C12427 | 0001831 | C0030580
T-12730 | Patella | PATELLA | 64234005 | 24485 | 0001374 | C33282 | 0002446 | C0030647
T-D6000 | Pelvis | PELVIS | 12921003 | 9578 | 0000030 | C12767 | 0002355 | C0030797
T-91000 | Penis | PENIS | 18911002 | 9707 | 0000408 | C12409 | 0000989 | C0030851
T-55000 | Pharynx | PHARYNX | 54066008 | 46688 | 0000432 | C12425 | 0001042 | C0031354
T-12420 | Radius | RADIUS | 62413002 | 23463 | 0001357 | C12777 | 0001423 | C0034627
T-59600 | Rectum | RECTUM | 34402009 | 14544 | 0000336 | C12390 | 0001052 | C0034896
T-11300 | Rib | RIB | 113197003 | 7574 | 0000315 | C12782 | 0002228 | C0035561
T-12280 | Scapula | SCAPULA | 79601000 | 13394 | 0001330 | C12783 | 0006849 | C0036277
T-AA110 | Sclera | SCLERA | 18619003 | 58269 | 0000280 | C12784 | 0001773 | C0036410
T-98000 | Scrotum | SCROTUM | 20233005 | 18252 | 0000409 | C12785 | 0001300 | C0036471
T-D2220 | Shoulder | SHOULDER | 16982005 | 25202 | 0000038 | C25203 | 0001467 | C0037004
T-11100 | Skull | SKULL | 89546000 | 46565 | 0000316 | C12789 | 0003128 | C0037303
T-C3000 | Spleen | SPLEEN | 78961009 | 7196 | 0000141 | C12432 | 0002106 | C0037993
T-11210 | Sternum | STERNUM | 56873002 | 7485 | 0001331 | C12793 | 0000975 | C0038293
T-15290 | Temporomandibular joint | TMJ | 53620006 | 54832 | 0002899 | C32888 | 0003700 | C0039493
T-94000 | Testis | TESTIS | 40689003 | 7210 | 0000411 | C12412 | 0000473 | C0039597
T-D9100 | Thigh | THIGH | 68367000 | 24967 | 0000052 | C33763 | 0000376 | C0039866
T-D8810 | Thumb | THUMB | 76505004 | 24938 | 0000454 | C52834 | 0001463 | C0040067
T-C8000 | Thymus | THYMUS | 9875009 | 9607 | 0000142 | C12433 | 0002370 | C0040113
T-B6000 | Thyroid | THYROID | 69748006 | 9603 | 0000129 | C12400 | 0002046 | C0040132
T-12740 | Tibia | TIBIA | 12611008 | 24476 | 0001361 | C12800 | 0000979 | C0040184
T-D9800 | Toe | TOE | 29707007 | 25046 | 0000048 | C33788 | 0001466 | C0040357
T-53000 | Tongue | TONGUE | 21974007 | 54640 | 0000347 | C12422 | 0001723 | C0040408
T-12430 | Ulna | ULNA | 23416004 | 23466 | 0001358 | C12809 | 0001424 | C0041600
T-D8200 | Upper arm | ARM | 40983000 | 24890 | 0000033 | C32141 | 0001460 | C0446516
T-73000 | Ureter | URETER | 87953007 | 9704 | 0000378 | C12416 | 0000056 | C0041951
T-75000 | Urethra | URETHRA | 13648007 | 19667 | 0000379 | C12417 | 0000057 | C0041967
T-83000 | Uterus | UTERUS | 35039007 | 17558 | 0000389 | C12405 | 0000995 | C0042149
T-82000 | Vagina | VAGINA | 76784001 | 19949 | 0000394 | C12407 | 0000996 | C0042232
T-81000 | Vulva | VULVA | 45292006 | 20462 | 0000395 | C12408 | 0000997 | C0042993

### Note

Since the Adult Mouse Anatomy Ontology is not in the UMLS, the mapping of Mouse Anatomy codes described here is an extract of a mapping to the NCI Thesaurus described in Hayamizu TF, de Coronado S, Fragoso G, Sioutos N, Kadin JA, Ringwald M. The mouse–human anatomy ontology mapping project. Database: The Journal of Biological Databases and Curation 2012;2012:bar066. doi:10.1093/database/bar066 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308156/. The mapping files used can be found at ftp://ftp.informatics.jax.org/pub/reports/ma2ncit.obo.

The NCI Thesaurus codes were then used to look up corresponding concepts in UMLS, from which SNOMED and FMA codes were extracted automatically (and various conflicts and ambiguities resolved manually). The same correspondence to existing Body Part Examined values is used as in other tables in this Annex.

Another mapping project using the FMA as a reference ontology was not used, since the files were not available. See Zhang S, Bodenreider O. Alignment of Multiple Ontologies of Anatomy: Deriving Indirect Mappings from Direct Mappings to a Reference. AMIA Annual Symposium Proceedings 2005;2005:864-868 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1560629/.

Table L-4. Correspondence between Animal-specific and Generic NCI Thesaurus Codes

Code Meaning | Generic NCIt ID | Generic UMLS Concept UniqueID | Mouse-specific NCIt ID | Mouse-specific UMLS Concept UniqueID | Rat-specific NCIt ID | Rat-specific UMLS Concept UniqueID
--- | --- | --- | --- | --- | --- | ---
Adrenal gland | C12666 | C0001625 | C22635 | C1515888 | C60540 | C1882555
Ankle joint | C32078 | C0003087 |  |  |  |
Aorta | C12669 | C0003483 | C23600 |  | C60541 | C1882561
Bladder | C12414 | C0005682 | C22729 | C1511191 | C60634 | C1882899
Brain | C12439 | C0006104 | C22606 | C1521713 | C60544 | C1882598
Breast | C12367 | C0929301 | C22549 | C1512980 | C60585 | C1882771
Bronchus | C12683 | C0006255 | C24050 | C1518036 | C60546 | C1882603
Buccal region of face | C13070 | C0007966 | C23972 |  |  |
Calcaneus | C32250 | C0006655 |  |  |  |
Carotid Artery | C12687 | C0007272 | C23618 |  |  |
Cerebellum | C12445 | C0007765 | C22609 | C1522278 | C60550 | C1882617
Cervix | C12311 | C0007874 |  |  | C60635 | C1882903
Clavicle | C12695 | C0008913 | C23626 |  |  |
Coccyx | C12696 | C0009194 |  |  |  |
Colon | C12382 | C0009368 | C22528 | C1522281 | C60554 | C1882628
Cornea | C12342 | C0010031 | C22717 | C2700413 |  |
Coronary artery | C12843 | C0205042 | C23773 |  |  |
Digit | C40186 | C0582802 |  |  |  |
Duodenum | C12263 | C0013303 | C22523 | C1522711 | C60558 | C1882648
Elbow joint | C32497 | C0013770 |  |  |  |
Esophagus | C12389 | C0014876 | C22509 | C1516967 | C60563 | C1882662
Extremity | C12429 | C0015385 | C23363 |  |  |
Eye | C12401 | C0015392 | C22711 | C1517081 | C60565 | C1882665
Eyelid | C12713 | C0015426 | C23644 |  | C60566 | C1882666
Face | C13071 | C0015450 | C23973 |  |  |
Femur | C12717 | C0015811 | C23648 |  | C60567 | C1882669
Fibula | C12718 | C0016068 | C23649 |  |  |
Finger | C32608 | C0016129 |  |  |  |
Foot | C32622 | C0016504 |  |  |  |
Frontal sinus | C12277 | C0016734 | C23210 |  |  |
Gallbladder | C12377 | C0016976 | C23312 |  |  |
Hand | C32712 | C0018563 |  |  |  |
Head | C12419 | C0018670 | C23353 |  |  |
Head and Neck | C12418 | C0460004 | C23352 |  |  |
Heart | C12727 | C0018787 | C22498 | C1512359 | C60571 | C1882687
Hip joint | C32742 | C0019558 |  |  |  |
Humerus | C12731 | C0020164 | C23662 |  |  |
Ileum | C12387 | C0020885 | C22525 | C1522516 | C60573 | C1882700
Ilium | C32765 | C0020889 |  |  |  |
Jaw region | C48821 | C0022359 | C22683 | C1511239 |  |
Jejunum | C12388 | C0022378 | C22524 | C1522714 | C60575 | C1882710
Kidney | C12415 | C0022646 | C22730 | C1517673 | C60577 | C1882714
Liver | C12392 | C0023884 | C22515 | C1517914 | C60581 | C1882726
Lower leg | C32974 | C1140621 |  |  |  |
Lung | C12468 | C0024109 | C22600 | C1518039 | C60582 | C1882727
Mandible | C12290 | C0024687 | C23223 |  |  |
Maxilla | C26470 | C0024947 |  |  |  |
Navicular of forefoot | C12854 | C0223724 |  |  |  |
Neck | C13063 | C0027530 | C23965 |  |  |
Orbital structure | C12347 | C0029180 | C23282 |  | C60594 | C1882803
Ovary | C12404 | C0029939 | C22656 | C1518753 | C60595 | C1882808
Pancreas | C12393 | C0030274 | C24044 | C1518865 | C60597 | C1882810
Parotid gland | C12427 | C0030580 | C22504 | C1527051 | C60600 | C1882814
Patella | C33282 | C0030647 |  |  |  |
Pelvis | C12767 | C0030797 | C23698 |  |  |
Penis | C12409 | C0030851 | C22172 | C1518951 |  |
Pharynx | C12425 | C0031354 | C22507 | C1519041 |  |
Radius | C12777 | C0034627 | C23708 |  |  |
Rectum | C12390 | C0034896 | C22532 | C1522513 | C60609 | C1882833
Rib | C12782 | C0035561 | C23713 |  |  |
Scapula | C12783 | C0036277 | C23714 |  |  |
Sclera | C12784 | C0036410 | C23715 |  |  |
Scrotum | C12785 | C0036471 | C22176 | C1519206 |  |
Shoulder | C25203 | C0037004 |  |  |  |
Skull | C12789 | C0037303 | C22684 | C1522418 |  |
Spleen | C12432 | C0037993 | C22556 | C1519474 | C60621 | C1882867
Sternum | C12793 | C0038293 | C23724 |  | C60622 | C1882873
Temporomandibular joint | C32888 | C0039493 |  |  |  |
Testis | C12412 | C0039597 | C22178 | C1515315 | C60625 | C1882878
Thigh | C33763 | C0039866 |  |  |  |
Thumb | C52834 | C0040067 |  |  |  |
Thymus | C12433 | C0040113 | C22553 | C1515438 | C60627 | C1882880
Thyroid | C12400 | C0040132 | C22650 | C1522142 | C60628 | C1882881
Tibia | C12800 | C0040184 | C23731 |  |  |
Toe | C33788 | C0040357 |  |  |  |
Tongue | C12422 | C0040408 | C22508 | C1519545 | C60629 | C1882882
Ulna | C12809 | C0041600 | C23740 |  |  |
Upper arm | C32141 | C0446516 |  |  |  |
Ureter | C12416 | C0041951 | C22738 | C1519822 | C60632 | C1882897
Urethra | C12417 | C0041967 | C22739 | C1519824 | C60633 | C1882898
Uterus | C12405 | C0042149 | C22671 | C1519876 | C60636 | C1882904
Vagina | C12407 | C0042232 | C22676 | C1519910 | C60637 | C1882906
Vulva | C12408 | C0042993 | C22677 | C1520067 |  |

### Note

For the mouse, NCIt contains some duplicate anatomical concepts, including those which have been marked inactive and appear to have been replaced with improved codes for the "Mouse Models of Human Cancers Consortium" (MMHCC). Whenever duplicates were found, the MMHCC concept has been used in this table.

This table was produced by searching NCIt for all concepts that had "mouse" or "rat" in their concept name or synonyms, and then using that synonym with the word "mouse" or "rat" removed, to match against generic concept names.

The NCI Thesaurus codes were then used to look up corresponding concepts in UMLS, though not all of the concepts are included in UMLS yet (especially the MMHCC concepts).

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